Plugins

DBLP and arXiv literature search, BibTeX retrieval and full-text acquisition with session-owned background jobs; an EduWork-maintained fork of SihanLv/dsh-literature.

Research-assistant plugin suite (literature search, research wiki, LaTeX compile, independent subagent review) for the DeepSeek Harness

DeepSeek Harness bundle registering one skill that turns long-form production (academic papers, industry analysis, business commentary) into a 9-role pipeline: T1 literature / T2 data / T3 case scouts running in parallel, T4 analyst, T5 writer, T6 critical companion, T7 auditor, T8 finalizer run by the coordinator, T9 peer reviewer — across 6 phases with triangular evidence verification, a 26-check M-gate (25 scripted checks plus one human checkpoint), a G0-G16 audit including a Chinese AI-trace gate, peer-review scoring with journal matching, and 4 human checkpoints. Installs with `dsh plugin add lunheng-article-pipeline` (package.json#dsh.bundle.patch plus a lib/index.js entry that registers the skill); ships role cards for T1-T9, templates and 36 zero-dependency verification scripts, with five-language READMEs.

Local literature knowledge-base RAG: 10 tools (kb_ingest, kb_search, kb_rag, kb_zotero, kb_dedup, kb_clear, kb_fetch, kb_scope, kb_stats, kb_status), hybrid BM25+vector+reranker search, cited QA with clickable DOI links, all-local bge embeddings over a single-file SQLite index. Needs Python 3.9+ with pymupdf, faiss-cpu and sentence-transformers; the `npx dsh-kb-rag-install` installer sets those up and pre-downloads the model.

AI-for-Science research workflow skill for DeepSeek Harness, aimed at researchers and grad students using agentic AI: multi-angle literature review with per-angle files, experiment design with a caveat list, figures and paper reading; each job returns files plus a cross-verification brief for a second model. Zero deps, MIT.

Local literature knowledge-base RAG for DSH: hybrid BM25 + vector retrieval, cross-encoder reranking, cited answers with section- and page-level provenance, metadata-only refresh and background ingest with progress polling, over a SQLite index.

Research Agent skills, literature search with citation tracking, document-to-markdown knowledge base builder, and in-depth reading with browser workbench for DeepSeek Harness.

Curated research plugin market: adds a Research plugins page to Settings with hand-reviewed plugins for literature search, reference management, writing and workbenches — one-click install, update and remove pinned to the reviewed version, restart from the panel, and exactly one network request (its own catalog).

Self-contained literature library for DSH with optional Zotero export: full-text PDF fetching (Unpaywall/arXiv/custom URL templates), loose Crossref-backed search, APA/GB-T 7714/MLA/Chicago citation generation, a side-panel PDF reader with highlights and notes, and AI-assisted Q&A/translation steered into the current conversation.

Adds local PDF reading, a durable paper library, traceable evidence records, and cross-paper comparison and synthesis tools.

Zotero skill for DeepSeek Harness: page-anchored Q&A, full-text translation and close reading, native highlights and Chinese notes, bilingual PDF and paragraph Markdown, evidence comparison tables, and reviews with citation tracking; finds papers on OpenAlex or Crossref, imports Chinese CNKI export files, classifies the library into research-direction folders, surfaces research gaps, and runs a ranked daily digest of new papers. Python-based (basic library management uses the standard library; the reading workflow downloads its PDF/OCR components on first use); writes need a one-time Zotero authorization, and daily scheduling is Windows-only. Adapted from the OpenAI MIT Zotero plugin.

Literature research toolset registering 26 model tools over PubMed, Europe PMC, OpenAlex, PubTator3 and Semantic Scholar: field-syntax search, ID conversion, bibliographic lookup, citation formatting, MeSH and related-article walking, PubTator bioconcept resolution and relation queries, Europe PMC and Semantic Scholar paging, full-text retrieval, and open-access PDF discovery with optional download. A unified search deduplicates hits across sources and orders results by cross-source hits, then relevance, then citation count; a session knowledge graph with PubTator concept enrichment commits to a persistent user graph and renders as Mermaid. Most sources need no key.

Academic literature search and citation tools for DeepSeek Harness: paper search via Crossref and OpenAlex with no API key, related-works discovery, and citation formatting in GB/T 7714, APA and BibTeX.

PubMed deep-research toolset: literature search, author investigation, same-name disambiguation, institution statistics and mentor-student matching.

Monitors IEEE Xplore journal Early Access through Crossref, has an LLM screen every new paper against your keywords, and emails a Markdown weekly digest.

Connects the hosted Knowra MCP server: search arXiv papers by topic, author or exact UTC dates without an account, and sign in with OAuth from the plugin page to read Scout reports on methods, evidence and limitations.

A biomedical Research Graph grounded in literature and experiment results. Fork hypotheses, connect evidence, advance research.

A bundle of molbio tools for molecular biology work:sequence analysis, primer and probe design (qPCR, TaqMan), in-silico PCR,cloning simulation,plasmid maps,sequencing validation,protein and CRISPR analysis,qPCR statistics,literature and lab records;installed as a preset-scoped bundle.

Turns one journal paper PDF into a Chinese group-meeting literature report deck (.pptx) in the Nanyang Normal University physics template, plus a matching Word speaker script. Requires Python 3 with python-pptx, python-docx, Pillow and pymupdf (pypdf fallback); install them with pip install -r requirements.txt.

Undermind literature search inside DeepSeek Harness. The plugin owns the OAuth authorization-code + PKCE login the remote MCP server requires, refreshes the rotating refresh token before expiry, re-initializes the MCP session when the server drops it, and registers every tool Undermind tools/list returns as a mcp__undermind__* tool, alongside a permanent undermind_auth tool for status, login, logout and retry. Needs an Undermind account and a client id - Undermind accepts a Client ID Metadata Document URL (CIMD) or a pre-registered client id, and does not support dynamic client registration.

Literature search for DeepSeek Harness: pubmed_search, pubmed_paper and pubmed_related over the official NCBI E-utilities (including elink related-article ranking), plus scholar_search and scholar_cite (MLA/APA/Chicago/Harvard/Vancouver/BibTeX via SerpApi). Both backends return one paper shape, and a settings card configures the API keys, the Scholar backend and the rate/result limits.

Biomedical research plugin for DeepSeek Harness (dsh): biomcp MCP server tools, scientific plotting skills, and deep-research subagent

Unofficial DeepSeek Harness port of the Academic Research Skills plugin (CC-BY-NC-4.0, non-commercial): 5 skills, 16 /ars-* commands, 4 agent roles, write-scope guard, and deterministic Python gates.

Searches medical and life-science literature by topic, keyword or DOI through Europe PMC, PubMed, OpenAlex and Crossref; decides open-access status through Unpaywall/OpenAlex/Europe PMC; downloads the PDF when an OA route exists (verified by magic bytes and page count) and otherwise writes a decision card with the exact failure reason plus four manual fallback channels: AbleSci assistance, Sci-Hub, SciDown and X-MOL. The bundled Python tool uses only the standard library.